
Flagship Pioneering is a pioneer in the life sciences industry, and its unique approach to innovation has made it a leading provider of services. With a focus on biotechnology, Flagship Pioneering has established itself as a trusted partner for entrepreneurs and scientists.
Flagship Pioneering's model is built around the concept of "venture capital with a twist", where it invests in companies and provides them with resources, expertise, and a network of connections to help them grow. This approach has led to the creation of over 100 companies, including Moderna Therapeutics and Syros Pharmaceuticals.
By providing a platform for scientists and entrepreneurs to collaborate and innovate, Flagship Pioneering has helped to drive advancements in the life sciences field. Its commitment to supporting early-stage companies has enabled them to scale quickly and effectively.
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Investments
Flagship Pioneering has made a significant number of investments, with a total of 417 investments under their belt. Their latest investment was in Mirai Bio as part of their Series A on September 26, 2024.
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They have invested in various companies, including Mirai Bio, Abiologics, and Prologue Medicines, all of which received $50M in funding as part of their Series A rounds. Each of these investments was a "Yes" to the question of whether they were new investments.
Flagship Pioneering has also invested in companies that have received funding through Series F and Series C rounds, although the exact amounts are not publicly disclosed due to subscription requirements.
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Service Providers
Flagship Pioneering has one service provider relationship. This means they work closely with one specific service provider to get things done.
Having a single service provider relationship can be beneficial in terms of efficiency and communication. It's like having one go-to person for all your needs.
Flagship Pioneering's service provider relationship is a key part of their operations.
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Partners & Customers
Flagship Pioneering has a strong network of partners and customers. It has 10 strategic partners and customers.
One of its notable partners is Pfizer, with whom it has a strategic partnership. This partnership was initiated in 2024 and has led to several agreements, including one where Flagship Pioneering's in-house drug discovery and development unit, Pioneering Medicines, will lead the exploration process to rapidly surface potential drug discovery and research programs built on Flagship's bioplatforms and modalities.
Flagship Pioneering has partnered with Pfizer on multiple occasions, with the most recent being on November 11, 2024. This partnership has led to several agreements, including one where Flagship Pioneering and Quotient Therapeutics will work together to identify potential novel targets for the treatment of cardiovascular and renal diseases.
Flagship Pioneering has also partnered with GSK, with whom it has committed $150M to start an R&D pact for novel drugs and vaccines. This partnership was initiated under the strategic partnership between Flagship Pioneering and Pfizer Inc.
Here are the details of Flagship Pioneering's partners and customers:
Companies

Flagship Pioneering has a diverse portfolio of companies across various stages of development. They have launched four new companies in the last year, including Empress Therapeutics, Ampersand Biomedicines, Metaphore Biotechnologies, and Montai Health.
These companies focus on small molecule to anthromolecule therapies, precision medicines, and even drugs based on biomimicry. Metaphore Biotechnologies, for instance, is using biomimicry to engineer therapeutics that mimic nature's solutions to complex problems.
Flagship's largest success to date is Moderna, the messenger RNA company that developed the COVID-19 vaccine. Moderna generated over $36 billion in sales from its COVID-19 vaccine and has also received breakthrough therapy designation for its RSV vaccine.
Other notable Flagship companies include Agios Therapeutics, which received FDA approval for its gene therapy Pyrukynd, and Seres Therapeutics, which received FDA approval for its microbiome-based therapy for C. difficile.
Here are some of the companies in Flagship's portfolio:
- Empress Therapeutics
- Ampersand Biomedicines
- Metaphore Biotechnologies
- Montai Health
- Moderna
- Agios Therapeutics
- Seres Therapeutics
- Tessera Therapeutics
Flagship has also created several unicorn companies worth over $1 billion, including Tessera Therapeutics, which was reportedly worth $1.7 billion as of April 2022.
10 Fund Histories
Flagship Pioneering has a total of 10 funds under its management, with various types of funds catering to different investment needs.
The flagship fund, Flagship Pioneering Fund VIII, closed on July 7, 2024, with an amount of $52.2 million.
Another notable fund is Flagship Pioneering - Origination Fund VII, which closed on June 14, 2021, with a massive amount of $3.4 billion.
One of the funds has a specific focus on multi-stage venture capital, the Flagship Pioneering Special Opportunities Fund II, which closed on March 20, 2019, with $824 million.
The amount of funds can vary greatly, with some having a specific amount mentioned, while others have a "Subscribe to see more" tag.
Here's a breakdown of the funds, their closing dates, and amounts:
These funds demonstrate the diverse range of investments that Flagship Pioneering has under its management, catering to various needs and goals.
Fails
Flagship's track record shows that failure is inevitable in drug development. Roughly 20 Flagship-funded companies have shuttered, including four in the last three years.
The most notable example is Kaleido Biosciences, a microbiome company that shut down in April 2022 after facing numerous setbacks. It completed a $75 million IPO three years prior, but couldn't recover from FDA warnings and financial struggles.
Ohana Biosciences, a reproductive health company, closed shop in April 2021 just 18 months after its launch. It initially focused on egg biology but shifted its focus to become the first sperm biology platform company.
Rubius Therapeutics attempted to pivot from an engineered red blood cell platform to a cell conjugation platform, but ultimately closed down in February 2023. It even dumped its lead candidate and cut 75% of its staff before shutting down.
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Company Information
Flagship Pioneering is a venture firm that creates, resources, and builds life science companies to tackle life-threatening health problems.
Flagship has a significant track record of success, having invested in companies like Moderna, the COVID-19 vaccine manufacturer. They recently raised a $3.4 billion capital pool, which will likely fund the creation of 20 to 25 new companies.
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Flagship's eight core principles guide their approach to creating and building life science companies. These principles are designed to foster innovation and entrepreneurship in the life sciences sector.
Here are Flagship's eight principles:
- Pioneer through harnessing science and entrepreneurialism to envision alternative futures by developing evolutionary methodology.
- Believe in achieving pioneering by communicating and replicating an idea through a team.
- Attract, develop, and retain top scientific, entrepreneurial, and managerial talents in the world.
- Form top-class companies by combining innovative capacity, entrepreneurial leadership, and professional capital management in a single enterprise.
- Take responsibility for their long-term success by providing them with the full resources of their ecosystem.
- Conceive solutions far beyond what is current in the present market and continuously innovating what people seek.
- Found businesses that own patented platforms, enabling years of products across multiple areas.
- Create world-class innovative and valuable life science companies to deliver exceptional returns to their capital partners.
Latest News
Flagship Pioneering is a venture firm that invests in and builds companies that address the world's most pressing problems.
The firm was founded in 2013 by Stephen Klasko, a physician and entrepreneur.
In 2019, Flagship Pioneering launched a $600 million fund to invest in early-stage companies.
Flagship Pioneering has a team of experts who work closely with entrepreneurs to develop and launch new companies.
The firm's portfolio includes companies like Moderna Therapeutics and Ginkgo Bioworks, which have made significant advancements in their respective fields.
Flagship Pioneering's approach to investing is focused on building companies that can scale quickly and make a meaningful impact.
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Expertise and Approach
Flagship Pioneering is led by Noubar Afeyan, Ph.D., who founded the company in 2000 and serves as its CEO. He brings a wealth of expertise to the table.
The company's team includes a range of experts, such as Lovisa Afezelius, Christopher Austin, Robert Berendes, Stephen Berenson, David Berry, and Ara Darzi, each with their own unique background and experience.
Flagship Pioneering's approach is centered around conceiving, resourcing, and building life science companies that invent breakthrough technologies. This focus on life science and biotech entrepreneurship is key to their success.
The company's lab and team work together to identify and support innovative projects that have the potential to transform healthcare and sustainability. This collaborative approach is a major strength of Flagship Pioneering.
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Frequently Asked Questions
What is a Flagship Pioneering company?
Flagship Pioneering is a life sciences innovation company that creates and funds groundbreaking companies to improve human health. It starts by leveraging its in-house scientists and resources to develop innovative ideas and solutions.
Does Flagship Pioneering pay well?
Flagship Pioneering salaries range from around $72,000 to over $179,000 per year, indicating a competitive compensation package. If you're interested in learning more about Flagship Pioneering's salaries and benefits, check out our detailed information on their compensation.
Sources
- https://en.wikipedia.org/wiki/Flagship_Pioneering
- https://www.cbinsights.com/investor/flagship-pioneering
- https://www.pharmavoice.com/news/Flagship-Pioneering-failures-successes-Pfizer-Pioneering-initiative/691219/
- https://www.forbes.com/sites/amyfeldman/2021/06/14/flagship-pioneering-the-investor-behind-moderna-raises-34-billion-for-new-fund/
- https://www.excedr.com/blog/venture-capitalist-flagship-pioneering
- https://www.gov.uk/government/news/flagship-pioneering-establishes-base-in-london-in-europe-first-win-for-uk-life-sciences
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